STRuster

 STRuster results: 46970

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Spectrin repeat-like
Superfamily: Spectrin repeat
Family: Spectrin repeat
Protein: Spectrin alpha chain
Species: Chicken (Gallus gallus)
Species SCOP sunid: 46970

 Set description
Number of entries: 14
SCOP Entries: d1u5pa1 d1u5pa2 d1cunb1 d1cunb2 d1u4qb2 d1u4qb3 d1u4qb1 d1u4qa3 d1u4qa2 d1u4qa1 d1cunc2 d1cunc1 d1cuna1 d1cuna2
Alignment File: 46970.alig
Aligned Sequences: 46970_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46970_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(68, 72), (111, 112), (178, 181), (239, 243), (284, 285)]
Uniprot Nr [(1730, 1734), (1772, 1773), (1839, 1842), (1900, 1904), (1945, 1946)]

 Invariant Regions
Region1
Alignment Nr[(0, 67), (73, 110), (113, 177), (182, 238), (244, 283), (286, 321)]
Uniprot Nr[(1662, 1729), (1735, 1771), (1774, 1838), (1843, 1899), (1905, 1944), (1947, 1982)]
Superposition-