STRuster

 STRuster results: 46821

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Helicase DNA-binding domain
Protein: Holliday junction helicase RuvB
Species: Thermus thermophilus
Species SCOP sunid: 46821

 Set description
Number of entries: 4
SCOP Entries: d1ixrc1 d1hqcb1 d1ixsb1 d1hqca1
Alignment File: 46821.alig
Aligned Sequences: 46821_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46821_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 36), (49, 75)]
Uniprot Nr [(243, 279), (292, 318)]

 Invariant Regions
Region1
Alignment Nr[(37, 48)]
Uniprot Nr[(280, 291)]
Superposition46821_superp_1.pdb.gz
Rasmol Script46821_superp_1.rsm
View in Jmol