STRuster

 STRuster results: 46795

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Arginine repressor (ArgR), N-terminal DNA-binding domain
Protein: Arginine repressor (ArgR), N-terminal DNA-binding domain
Species: Bacillus stearothermophilus
Species SCOP sunid: 46795

 Set description
Number of entries: 6
SCOP Entries: d1b4af1 d1b4ac1 d1b4ae1 d1b4ab1 d1b4ad1 d1b4aa1
Alignment File: 46795.alig
Aligned Sequences: 46795_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46795_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(59, 74)]
Uniprot Nr [(63, 78)]

 Invariant Regions
Region1
Alignment Nr[(0, 58)]
Uniprot Nr[(4, 62)]
Superposition46795_superp_1.pdb.gz
Rasmol Script46795_superp_1.rsm
View in Jmol