STRuster

 STRuster results: 46682

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Cytochrome c
Superfamily: Cytochrome c
Family: Two-domain cytochrome c
Protein: Cytochrome c4
Species: Pseudomonas stutzeri
Species SCOP sunid: 46682

 Set description
Number of entries: 20
SCOP Entries: d1m70d1 d1m70d2 d1m6zb2 d1m6zb1 d1m70c1 d1m70c2 d1etpa2 d1etpa1 d1etpb2 d1etpb1 d1m6zc2 d1m70b2 d1m70b1 d1m6zd1 d1m6zd2 d1m70a2 d1m70a1 d1m6za2 d1m6za1 d1m6zc1
Alignment File: 46682.alig
Aligned Sequences: 46682_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46682_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(162, 162)]
Uniprot Nr [(183, 183)]

 Invariant Regions
Region1
Alignment Nr[(0, 161), (163, 189)]
Uniprot Nr[(21, 182), (184, 210)]
Superposition-