STRuster

 STRuster results: 46678

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Cytochrome c
Superfamily: Cytochrome c
Family: Cytochrome bc1 domain
Protein: Cytochrome bc1 domain
Species: Cow (Bos taurus)
Species SCOP sunid: 46678

 Set description
Number of entries: 9
SCOP Entries: d1sqbd1 d1be3d2 d1nu1d1 d1l0ld1 d1ntzd1 d1ntmd1 d1ntkd1 d1qcrd2 d1l0nd1
Alignment File: 46678.alig
Aligned Sequences: 46678_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46678_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 6), (47, 54), (66, 92), (104, 118), (142, 145), (161, 173)]
Uniprot Nr [(1, 7), (48, 55), (67, 93), (105, 119), (143, 146), (162, 174)]

 Invariant Regions
Region1
Alignment Nr[(7, 46), (55, 65), (93, 103), (119, 141), (146, 160), (174, 194)]
Uniprot Nr[(8, 47), (56, 66), (94, 104), (120, 142), (147, 161), (175, 195)]
Superposition46678_superp_1.pdb.gz
Rasmol Script46678_superp_1.rsm
View in Jmol