STRuster

 STRuster results: 46674

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Cytochrome c
Superfamily: Cytochrome c
Family: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase
Protein: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase
Species: Pseudomonas aeruginosa
Species SCOP sunid: 46674

 Set description
Number of entries: 16
SCOP Entries: d1n90a1 d1bl9a1 d1nnoa1 d1nirb1 d1n90b1 d1n15b1 d1gjqb1 d1n15a1 d1gjqa1 d1nira1 d1bl9b1 d1nnob1 d1hzua1 d1n50a1 d1hzva1 d1n50b1
Alignment File: 46674.alig
Aligned Sequences: 46674_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46674_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(20, 22), (52, 58), (112, 114)]
Uniprot Nr [(48, 50), (80, 86), (140, 142)]

 Invariant Regions
Region1
Alignment Nr[(0, 19), (23, 51), (59, 111)]
Uniprot Nr[(28, 47), (51, 79), (87, 139)]
Superposition46674_superp_1.pdb.gz
Rasmol Script46674_superp_1.rsm
View in Jmol