STRuster

 STRuster results: 46655

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Cytochrome c
Superfamily: Cytochrome c
Family: monodomain cytochrome c
Protein: Cytochrome c2
Species: Rhodopseudomonas palustris
Species SCOP sunid: 46655

 Set description
Number of entries: 10
SCOP Entries: d1i8pa_ d1fj0d_ d1i8pb_ d1fj0c_ d1i8oa_ d1i8pc_ d1fj0b_ d1fj0a_ d1i8pd_ d1hh7a_
Alignment File: 46655.alig
Aligned Sequences: 46655_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46655_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(91, 92)]
Uniprot Nr [(117, 118)]

 Invariant Regions
Region1
Alignment Nr[(0, 90), (93, 113)]
Uniprot Nr[(26, 116), (119, 139)]
Superposition46655_superp_1.pdb.gz
Rasmol Script46655_superp_1.rsm
View in Jmol