STRuster

 STRuster results: 46653

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Cytochrome c
Superfamily: Cytochrome c
Family: monodomain cytochrome c
Protein: Cytochrome c2
Species: Rhodobacter sphaeroides
Species SCOP sunid: 46653

 Set description
Number of entries: 5
SCOP Entries: d1cxa__ d1l9jc_ d1cxc__ d1l9jd_ d1l9bc_
Alignment File: 46653.alig
Aligned Sequences: 46653_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 46653_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (99, 101)]
Uniprot Nr [(1, 2), (100, 102)]

 Invariant Regions
Region1
Alignment Nr[(2, 98), (102, 123)]
Uniprot Nr[(3, 99), (103, 124)]
Superposition46653_superp_1.pdb.gz
Rasmol Script46653_superp_1.rsm
View in Jmol