STRuster

 STRuster results: 118256

 SCOP 1.71 classification
Class: Small proteins
Fold: Cystine-knot cytokines
Superfamily: Cystine-knot cytokines
Family: Platelet-derived growth factor-like
Protein: Vascular endothelial growth factor, VEGF
Species: Russell's viper (Daboia russelli russelli)
Species SCOP sunid: 118256

 Set description
Number of entries: 2
SCOP Entries: d1wq9a_ d1wq9b_
Alignment File: 118256.alig
Aligned Sequences: 118256_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 118256_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(50, 52), (75, 76)]
Uniprot Nr [(50, 52), (75, 76)]

 Invariant Regions
Region1
Alignment Nr[(0, 49), (53, 74), (77, 96)]
Uniprot Nr[(1, 49), (53, 74), (77, 96)]
Superposition118256_superp_1.pdb.gz
Rasmol Script118256_superp_1.rsm
View in Jmol