STRuster

 STRuster results: 118194

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: DNA/RNA polymerases
Superfamily: DNA/RNA polymerases
Family: DNA polymerase I
Protein: phi29 DNA polymerase
Species: Bacteriophage phi-29
Species SCOP sunid: 118194

 Set description
Number of entries: 3
SCOP Entries: d1xhza2 d1xi1a2 d1xhxa2
Alignment File: 118194.alig
Aligned Sequences: 118194_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 118194_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(115, 125), (205, 221), (319, 322)]
Uniprot Nr [(303, 313), (393, 409), (507, 510)]

 Invariant Regions
Region1
Alignment Nr[(0, 114), (126, 204), (222, 318), (323, 387)]
Uniprot Nr[(188, 302), (314, 392), (410, 506), (511, 575)]
Superposition118194_superp_1.pdb.gz
Rasmol Script118194_superp_1.rsm
View in Jmol