STRuster

 STRuster results: 117950

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK
Protein: Nucleoside diphosphate kinase, NDK
Species: Thale cress (Arabidopsis thaliana), chloroplast NDK2
Species SCOP sunid: 117950

 Set description
Number of entries: 12
SCOP Entries: d1s57b_ d1s59e_ d1s59f_ d1s57d_ d1s59c_ d1s57a_ d1s59d_ d1s57f_ d1s59a_ d1s57e_ d1s57c_ d1s59b_
Alignment File: 117950.alig
Aligned Sequences: 117950_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 117950_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2)]
Uniprot Nr [(79, 81)]

 Invariant Regions
Region1
Alignment Nr[(3, 152)]
Uniprot Nr[(82, 231)]
Superposition117950_superp_1.pdb.gz
Rasmol Script117950_superp_1.rsm
View in Jmol