| STRuster results: 117748 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Periplasmic binding protein-like II |
| Superfamily: | Periplasmic binding protein-like II |
| Family: | Phosphate binding protein-like |
| Protein: | ABC transporter, periplasmic substrate-binding protein VCA0807 |
| Species: | Vibrio cholerae |
| Species SCOP sunid: | 117748 |
| Set description |
| Number of entries: | 8 |
| SCOP Entries: | d1twyb_ d1twya_ d1twyf_ d1twyh_ d1twyc_ d1twyg_ d1twye_ d1twyd_ |
| Alignment File: | 117748.alig |
| Aligned Sequences: | 117748_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 117748_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 8), (56, 58), (128, 129)] |
| Uniprot Nr | [(26, 34), (80, 82), (152, 153)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(59, 127), (130, 253)] |
| Uniprot Nr | [(83, 151), (154, 273)] |
| Superposition | 117748_superp_1.pdb.gz |
| Rasmol Script | 117748_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(9, 55)] |
| Uniprot Nr | [(35, 79)] |
| Superposition | 117748_superp_2.pdb.gz |
| Rasmol Script | 117748_superp_2.rsm |
| View in Jmol | |
