STRuster

 STRuster results: 117542

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: RecA protein-like (ATPase-domain)
Protein: NTPase P4
Species: Bacteriophage phi-12
Species SCOP sunid: 117542

 Set description
Number of entries: 45
SCOP Entries: d1w4bb_ d1w4cd_ d1w4cw_ d1w46a_ d1w49b_ d1w44b_ d1w4co_ d1w4ab_ d1w47b_ d1w46b_ d1w4cr_ d1w48a_ d1w4cj_ d1w47a_ d1w4cb_ d1w4cq_ d1w4cv_ d1w4ci_ d1w4ca_ d1w4ct_ d1w49c_ d1w44a_ d1w4cl_ d1w46c_ d1w48c_ d1w4cs_ d1w4ac_ d1w47c_ d1w4ck_ d1w4bc_ d1w4cc_ d1w49a_ d1w44c_ d1w4cn_ d1w4cf_ d1w4aa_ d1w4cg_ d1w4cu_ d1w4cm_ d1w48b_ d1w4ce_ d1w4ba_ d1w4cx_ d1w4cp_ d1w4ch_
Alignment File: 117542.alig
Aligned Sequences: 117542_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 117542_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(131, 133), (234, 248)]
Uniprot Nr [(132, 134), (235, 249)]

 Invariant Regions
Region1
Alignment Nr[(0, 130), (134, 233), (249, 320)]
Uniprot Nr[(1, 131), (135, 234), (250, 321)]
Superposition117542_superp_1.pdb.gz
Rasmol Script117542_superp_1.rsm
View in Jmol