STRuster

 STRuster results: 117366

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: (Trans)glycosidases
Family: Amylase, catalytic domain
Protein: Bacterial alpha-amylase
Species: Bacillus sp. strain 707
Species SCOP sunid: 117366

 Set description
Number of entries: 2
SCOP Entries: d1wpca2 d1wp6a2
Alignment File: 117366.alig
Aligned Sequences: 117366_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 117366_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(333, 334)]
Uniprot Nr [(371, 372)]

 Invariant Regions
Region1
Alignment Nr[(0, 332), (335, 393)]
Uniprot Nr[(38, 370), (373, 431)]
Superposition117366_superp_1.pdb.gz
Rasmol Script117366_superp_1.rsm
View in Jmol