STRuster

 STRuster results: 117332

 SCOP 1.71 classification
Class: All beta proteins
Fold: beta-clip
Superfamily: Head decoration protein D (gpD, major capsid protein D)
Family: Head decoration protein D (gpD, major capsid protein D)
Protein: Head decoration protein D (gpD, major capsid protein D)
Species: Bacteriophage P21
Species SCOP sunid: 117332

 Set description
Number of entries: 8
SCOP Entries: d1td3b_ d1td0b_ d1td0a_ d1td4a_ d1td3a_ d1td0d_ d1td0c_ d1td3c_
Alignment File: 117332.alig
Aligned Sequences: 117332_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 117332_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (102, 104)]
Uniprot Nr [(12, 13), (113, 115)]

 Invariant Regions
Region1
Alignment Nr[(2, 101)]
Uniprot Nr[(14, 112)]
Superposition117332_superp_1.pdb.gz
Rasmol Script117332_superp_1.rsm
View in Jmol