STRuster

 STRuster results: 116809

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: PadR-like
Protein: Predicted transcriptional regulator
Species: Clostridium thermocellum
Species SCOP sunid: 116809

 Set description
Number of entries: 2
SCOP Entries: d1xmab_ d1xmaa_
Alignment File: 116809.alig
Aligned Sequences: 116809_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 116809_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 5)]
Uniprot Nr [(1, 6)]

 Invariant Regions
Region1
Alignment Nr[(6, 105)]
Uniprot Nr[(7, 106)]
Superposition116809_superp_1.pdb.gz
Rasmol Script116809_superp_1.rsm
View in Jmol