STRuster

 STRuster results: 111372

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: HlyD-like secretion proteins
Superfamily: HlyD-like secretion proteins
Family: HlyD-like secretion proteins
Protein: Multidrug resistance protein MexA domain
Species: Pseudomonas aeruginosa
Species SCOP sunid: 111372

 Set description
Number of entries: 26
SCOP Entries: d1vf7e_ d1t5ea_ d1vf7b_ d1t5ei_ d1t5eh_ d1vf7g_ d1t5ed_ d1vf7l_ d1t5el_ d1vf7d_ d1vf7k_ d1t5eg_ d1vf7m_ d1t5eb_ d1t5ef_ d1vf7f_ d1t5ee_ d1t5ej_ d1t5ec_ d1t5em_ d1vf7c_ d1vf7h_ d1vf7i_ d1t5ek_ d1vf7a_ d1vf7j_
Alignment File: 111372.alig
Aligned Sequences: 111372_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 111372_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 5), (80, 82), (207, 211), (243, 251)]
Uniprot Nr [(46, 51), (126, 128), (253, 257), (289, 297)]

 Invariant Regions
Region1
Alignment Nr[(6, 79), (83, 206), (212, 242)]
Uniprot Nr[(52, 125), (129, 252), (258, 288)]
Superposition111372_superp_1.pdb.gz
Rasmol Script111372_superp_1.rsm
View in Jmol