STRuster

 STRuster results: 111319

 SCOP 1.71 classification
Class: Multi-domain proteins (alpha and beta)
Fold: Release factor
Superfamily: Release factor
Family: Release factor
Protein: Peptide chain release factor 1, RF1
Species: Thermotoga maritima
Species SCOP sunid: 111319

 Set description
Number of entries: 3
SCOP Entries: d1rq0b_ d1rq0a_ d1rq0c_
Alignment File: 111319.alig
Aligned Sequences: 111319_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 111319_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 27), (45, 60), (79, 83), (168, 169), (204, 215), (259, 261), (279, 280), (327, 332)]
Uniprot Nr [(1, 28), (46, 61), (80, 84), (169, 170), (205, 216), (260, 262), (280, 281), (328, 333)]

 Invariant Regions
Region1
Alignment Nr[(28, 44), (61, 78), (84, 167), (170, 203), (216, 258), (281, 326)]
Uniprot Nr[(29, 45), (62, 79), (85, 168), (171, 204), (217, 259), (282, 327)]
Superposition111319_superp_1.pdb.gz
Rasmol Script111319_superp_1.rsm
View in Jmol