STRuster

 STRuster results: 111218

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ntn hydrolase-like
Superfamily: N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Family: Class II glutamine amidotransferases
Protein: Hypothetical protein YafJ (PA1307)
Species: Pseudomonas aeruginosa
Species SCOP sunid: 111218

 Set description
Number of entries: 2
SCOP Entries: d1te5b_ d1te5a_
Alignment File: 111218.alig
Aligned Sequences: 111218_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 111218_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(48, 84)]
Uniprot Nr [(50, 86)]

 Invariant Regions
Region1
Alignment Nr[(0, 47), (85, 252)]
Uniprot Nr[(2, 49), (87, 254)]
Superposition111218_superp_1.pdb.gz
Rasmol Script111218_superp_1.rsm
View in Jmol