| STRuster results: 111216 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | DNase I-like |
| Superfamily: | DNase I-like |
| Family: | DNase I-like |
| Protein: | Endonuclease domain of TRAS1 retrotransposon (ORF2) |
| Species: | Silkworm (Bombyx mori) |
| Species SCOP sunid: | 111216 |
| Set description |
| Number of entries: | 2 |
| SCOP Entries: | d1wdua_ d1wdub_ |
| Alignment File: | 111216.alig |
| Aligned Sequences: | 111216_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 111216_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(73, 75), (89, 89), (122, 126), (237, 239), (253, 256)] |
| Uniprot Nr | [(1, 3), (17, 17), (50, 54), (165, 167), (181, 184)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 72), (76, 88), (90, 121), (127, 236), (240, 252)] |
| Uniprot Nr | [(0, 0), (4, 16), (18, 49), (55, 164), (168, 180)] |
| Superposition | 111216_superp_1.pdb.gz |
| Rasmol Script | 111216_superp_1.rsm |
| View in Jmol | |
