STRuster

 STRuster results: 111154

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Pentein, beta/alpha-propeller
Superfamily: Pentein
Family: Peptidylarginine deiminase Pad4, catalytic C-terminal domain
Protein: Peptidylarginine deiminase Pad4, catalytic C-terminal domain
Species: Human (Homo sapiens)
Species SCOP sunid: 111154

 Set description
Number of entries: 3
SCOP Entries: d1wd9a3 d1wd8a3 d1wdaa3
Alignment File: 111154.alig
Aligned Sequences: 111154_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 111154_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(17, 18), (40, 43), (54, 56), (75, 76), (350, 353)]
Uniprot Nr [(311, 312), (334, 337), (348, 350), (369, 370), (644, 647)]

 Invariant Regions
Region1
Alignment Nr[(0, 16), (19, 39), (44, 53), (57, 74), (77, 349), (354, 369)]
Uniprot Nr[(294, 310), (313, 333), (338, 347), (351, 368), (371, 643), (648, 663)]
Superposition111154_superp_1.pdb.gz
Rasmol Script111154_superp_1.rsm
View in Jmol