STRuster

 STRuster results: 111142

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: N-acetylmuramoyl-L-alanine amidase-like
Superfamily: N-acetylmuramoyl-L-alanine amidase-like
Family: N-acetylmuramoyl-L-alanine amidase-like
Protein: Peptidoglycan recognition protein I-alpha
Species: Human (Homo sapiens)
Species SCOP sunid: 111142

 Set description
Number of entries: 3
SCOP Entries: d1twqa_ d1sk3a_ d1sk4a_
Alignment File: 111142.alig
Aligned Sequences: 111142_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 111142_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(123, 123), (143, 151), (163, 165)]
Uniprot Nr [(299, 299), (319, 327), (339, 341)]

 Invariant Regions
Region1
Alignment Nr[(0, 122), (124, 142)]
Uniprot Nr[(177, 299), (300, 318)]
Superposition111142_superp_1.pdb.gz
Rasmol Script111142_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(152, 162)]
Uniprot Nr[(328, 338)]
Superposition111142_superp_2.pdb.gz
Rasmol Script111142_superp_2.rsm
View in Jmol