STRuster

 STRuster results: 111117

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Profilin-like
Superfamily: GAF domain-like
Family: HrcA C-terminal domain-like
Protein: Heat-inducible transcription repressor HrcA, C-terminal domain
Species: Thermotoga maritima
Species SCOP sunid: 111117

 Set description
Number of entries: 3
SCOP Entries: d1stzc2 d1stza2 d1stzb2
Alignment File: 111117.alig
Aligned Sequences: 111117_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 111117_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(78, 79), (102, 124)]
Uniprot Nr [(179, 180), (203, 225)]

 Invariant Regions
Region1
Alignment Nr[(0, 77), (80, 101), (125, 235)]
Uniprot Nr[(101, 178), (181, 202), (226, 336)]
Superposition111117_superp_1.pdb.gz
Rasmol Script111117_superp_1.rsm
View in Jmol