STRuster

 STRuster results: 110718

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Phosphotransacetylase
Protein: Phosphotransacetylase Pta
Species: Methanosarcina thermophila
Species SCOP sunid: 110718

 Set description
Number of entries: 4
SCOP Entries: d1qztd_ d1qzta_ d1qztc_ d1qztb_
Alignment File: 110718.alig
Aligned Sequences: 110718_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110718_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(137, 149), (319, 331)]
Uniprot Nr [(138, 150), (320, 332)]

 Invariant Regions
Region1
Alignment Nr[(0, 136)]
Uniprot Nr[(1, 137)]
Superposition110718_superp_1.pdb.gz
Rasmol Script110718_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(150, 318)]
Uniprot Nr[(151, 319)]
Superposition110718_superp_2.pdb.gz
Rasmol Script110718_superp_2.rsm
View in Jmol