STRuster

 STRuster results: 110715

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Isocitrate/Isopropylmalate dehydrogenase-like
Superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
Family: Dimeric isocitrate & isopropylmalate dehydrogenases
Protein: NADP-dependent isocitrate dehydrogenase
Species: Human (Homo sapiens)
Species SCOP sunid: 110715

 Set description
Number of entries: 6
SCOP Entries: d1t0lb_ d1t0la_ d1t09a_ d1t0ld_ d1t09b_ d1t0lc_
Alignment File: 110715.alig
Aligned Sequences: 110715_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110715_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(116, 140), (158, 161), (184, 192), (206, 207), (258, 285), (380, 381), (410, 413)]
Uniprot Nr [(117, 141), (159, 162), (185, 193), (207, 208), (259, 286), (381, 382), (411, 414)]

 Invariant Regions
Region1
Alignment Nr[(141, 157), (162, 183), (193, 205), (208, 257)]
Uniprot Nr[(142, 158), (163, 184), (194, 206), (209, 258)]
Superposition110715_superp_1.pdb.gz
Rasmol Script110715_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 115), (286, 379), (382, 409)]
Uniprot Nr[(1, 116), (287, 380), (383, 410)]
Superposition110715_superp_2.pdb.gz
Rasmol Script110715_superp_2.rsm
View in Jmol