STRuster

 STRuster results: 110577

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Extended AAA-ATPase domain
Protein: Replication protein E1 helicase domain
Species: Human papillomavirus type 18
Species SCOP sunid: 110577

 Set description
Number of entries: 6
SCOP Entries: d1tuem_ d1tueh_ d1tuek_ d1tuef_ d1tuea_ d1tued_
Alignment File: 110577.alig
Aligned Sequences: 110577_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110577_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(87, 87), (128, 135)]
Uniprot Nr [(512, 512), (553, 560)]

 Invariant Regions
Region1
Alignment Nr[(0, 86), (88, 127), (136, 204)]
Uniprot Nr[(427, 511), (513, 552), (561, 629)]
Superposition110577_superp_1.pdb.gz
Rasmol Script110577_superp_1.rsm
View in Jmol