STRuster

 STRuster results: 110394

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: GlpP-like
Family: GlpP-like
Protein: Glycerol uptake operon antiterminator-related protein TM1436
Species: Thermotoga maritima
Species SCOP sunid: 110394

 Set description
Number of entries: 4
SCOP Entries: d1vkfc_ d1vkfd_ d1vkfa_ d1vkfb_
Alignment File: 110394.alig
Aligned Sequences: 110394_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110394_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(13, 16)]
Uniprot Nr [(13, 16)]

 Invariant Regions
Region1
Alignment Nr[(0, 12), (17, 174)]
Uniprot Nr[(1, 12), (17, 172)]
Superposition110394_superp_1.pdb.gz
Rasmol Script110394_superp_1.rsm
View in Jmol