STRuster

 STRuster results: 110386

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: UROD/MetE-like
Family: Cobalamin-independent methionine synthase
Protein: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE
Species: Thale cress (Arabidopsis thaliana)
Species SCOP sunid: 110386

 Set description
Number of entries: 8
SCOP Entries: d1u1ha2 d1u1ha1 d1u22a2 d1u22a1 d1u1ja2 d1u1ja1 d1u1ua1 d1u1ua2
Alignment File: 110386.alig
Aligned Sequences: 110386_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110386_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(404, 412), (447, 452), (468, 472), (486, 499), (548, 549), (664, 666), (691, 699), (720, 721), (738, 741), (754, 776)]
Uniprot Nr [(398, 406), (441, 446), (462, 466), (480, 493), (540, 541), (651, 653), (677, 685), (706, 707), (723, 726), (739, 760)]

 Invariant Regions
Region1
Alignment Nr[(0, 403), (413, 446), (473, 485), (500, 547), (550, 663), (667, 690), (700, 719), (722, 737), (742, 753)]
Uniprot Nr[(2, 397), (407, 440), (467, 479), (494, 539), (542, 650), (654, 676), (686, 705), (708, 722), (727, 738)]
Superposition-
 
Region2
Alignment Nr[(413, 446), (453, 467), (473, 485), (550, 663), (667, 690)]
Uniprot Nr[(407, 440), (447, 461), (467, 479), (542, 650), (654, 676)]
Superposition-