STRuster

 STRuster results: 110199

 SCOP 1.71 classification
Class: All beta proteins
Fold: OB-fold
Superfamily: Nucleic acid-binding proteins
Family: Cold shock DNA-binding domain-like
Protein: S1-domain of Ribonuclease E
Species: Escherichia coli
Species SCOP sunid: 110199

 Set description
Number of entries: 4
SCOP Entries: d1smxa_ d1sn8a_ d1sn8b_ d1smxb_
Alignment File: 110199.alig
Aligned Sequences: 110199_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110199_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(40, 48)]
Uniprot Nr [(79, 87)]

 Invariant Regions
Region1
Alignment Nr[(0, 39), (49, 86)]
Uniprot Nr[(39, 78), (88, 125)]
Superposition110199_superp_1.pdb.gz
Rasmol Script110199_superp_1.rsm
View in Jmol