STRuster

 STRuster results: 110104

 SCOP 1.71 classification
Class: All beta proteins
Fold: Cupredoxin-like
Superfamily: Cupredoxins
Family: Multidomain cupredoxins
Protein: Coagulation factor V
Species: Cow (Bos taurus)
Species SCOP sunid: 110104

 Set description
Number of entries: 4
SCOP Entries: d1sdda1 d1sdda2 d1sddb1 d1sddb2
Alignment File: 110104.alig
Aligned Sequences: 110104_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110104_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(169, 171), (194, 195), (210, 211), (242, 254)]
Uniprot Nr [(198, 200), (223, 224), (239, 240), (271, 283)]

 Invariant Regions
Region1
Alignment Nr[(0, 168), (196, 209), (255, 1861)]
Uniprot Nr[(29, 197), (225, 238), (284, 1890)]
Superposition-
 
Region2
Alignment Nr[(0, 168), (212, 241)]
Uniprot Nr[(29, 197), (241, 270)]
Superposition-