STRuster

 STRuster results: 110086

 SCOP 1.71 classification
Class: All beta proteins
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: Peptidylarginine deiminase Pad4, middle domain
Family: Peptidylarginine deiminase Pad4, middle domain
Protein: Peptidylarginine deiminase Pad4, middle domain
Species: Human (Homo sapiens)
Species SCOP sunid: 110086

 Set description
Number of entries: 3
SCOP Entries: d1wd9a1 d1wdaa1 d1wd8a1
Alignment File: 110086.alig
Aligned Sequences: 110086_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110086_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(41, 43), (58, 63)]
Uniprot Nr [(154, 156), (171, 176)]

 Invariant Regions
Region1
Alignment Nr[(0, 40), (44, 57), (64, 180)]
Uniprot Nr[(113, 153), (157, 170), (177, 293)]
Superposition110086_superp_1.pdb.gz
Rasmol Script110086_superp_1.rsm
View in Jmol