STRuster

 STRuster results: 110043

 SCOP 1.71 classification
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Family: V set domains (antibody variable domain-like)
Protein: Novel antigen receptor (against lysozyme)
Species: Nurse shark (Ginglymostoma cirratum)
Species SCOP sunid: 110043

 Set description
Number of entries: 3
SCOP Entries: d1t6vn_ d1sq2n_ d1t6vo_
Alignment File: 110043.alig
Aligned Sequences: 110043_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 110043_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(39, 40)]
Uniprot Nr [(41, 42)]

 Invariant Regions
Region1
Alignment Nr[(0, 38), (41, 111)]
Uniprot Nr[(2, 40), (43, 113)]
Superposition110043_superp_1.pdb.gz
Rasmol Script110043_superp_1.rsm
View in Jmol