STRuster

 STRuster results: 110001

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Triger factor/SurA peptide-binding domain-like
Superfamily: Triger factor/SurA peptide-binding domain-like
Family: TF C-terminus
Protein: Trigger factor, C-terminal domain
Species: Escherichia coli
Species SCOP sunid: 110001

 Set description
Number of entries: 2
SCOP Entries: d1w26a1 d1w26b1
Alignment File: 110001.alig
Aligned Sequences: 110001_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 110001_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 15), (71, 83), (114, 118), (129, 131), (157, 157), (181, 189)]
Uniprot Nr [(248, 263), (318, 330), (361, 365), (375, 377), (401, 401), (425, 432)]

 Invariant Regions
Region1
Alignment Nr[(16, 70), (84, 113), (158, 180)]
Uniprot Nr[(264, 317), (331, 360), (402, 424)]
Superposition110001_superp_1.pdb.gz
Rasmol Script110001_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(84, 113), (119, 128)]
Uniprot Nr[(331, 360), (366, 374)]
Superposition110001_superp_2.pdb.gz
Rasmol Script110001_superp_2.rsm
View in Jmol
 
Region3
Alignment Nr[(119, 128), (132, 156)]
Uniprot Nr[(366, 374), (378, 400)]
Superposition110001_superp_3.pdb.gz
Rasmol Script110001_superp_3.rsm
View in Jmol