STRuster

 STRuster results: 109878

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Flavivirus capsid protein C
Superfamily: Flavivirus capsid protein C
Family: Flavivirus capsid protein C
Protein: Flavivirus capsid protein C
Species: Kunjin virus
Species SCOP sunid: 109878

 Set description
Number of entries: 8
SCOP Entries: d1sfkf_ d1sfka_ d1sfkd_ d1sfkg_ d1sfkb_ d1sfke_ d1sfkh_ d1sfkc_
Alignment File: 109878.alig
Aligned Sequences: 109878_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 109878_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 15)]
Uniprot Nr [(25, 40)]

 Invariant Regions
Region1
Alignment Nr[(16, 72)]
Uniprot Nr[(41, 97)]
Superposition109878_superp_1.pdb.gz
Rasmol Script109878_superp_1.rsm
View in Jmol