STRuster

 STRuster results: 109773

 SCOP 1.71 classification
Class: All alpha proteins
Fold: Four-helical up-and-down bundle
Superfamily: Nickel-containing superoxide dismutase, NiSOD
Family: Nickel-containing superoxide dismutase, NiSOD
Protein: Nickel-containing superoxide dismutase, NiSOD
Species: Streptomyces seoulensis
Species SCOP sunid: 109773

 Set description
Number of entries: 54
SCOP Entries: d1q0de_ d1q0kd_ d1q0ff_ d1q0gh_ d1q0kl_ d1q0df_ d1q0dj_ d1q0gc_ d1q0kg_ d1q0fc_ d1q0gk_ d1q0mb_ d1q0dc_ d1q0gf_ d1q0dk_ d1q0kb_ d1q0fh_ d1q0ma_ d1q0fk_ d1q0kj_ d1q0dd_ d1q0ga_ d1q0dl_ d1q0ke_ d1q0fe_ d1q0gi_ d1q0di_ d1q0da_ d1q0fb_ d1q0gd_ d1q0gl_ d1q0fj_ d1q0mc_ d1q0kh_ d1q0db_ d1q0gg_ d1q0kc_ d1q0dh_ d1q0fg_ d1q0kk_ d1q0mf_ d1q0dg_ d1q0gb_ d1q0kf_ d1q0fd_ d1q0gj_ d1q0fl_ d1q0me_ d1q0md_ d1q0fa_ d1q0ge_ d1q0ka_ d1q0fi_ d1q0ki_
Alignment File: 109773.alig
Aligned Sequences: 109773_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 109773_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 116)]
Uniprot Nr[(15, 131)]
Superposition109773_superp_1.pdb.gz
Rasmol Script109773_superp_1.rsm
View in Jmol