STRuster

 STRuster results: 109712

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: KorB DNA-binding domain-like
Family: KorB DNA-binding domain-like
Protein: Transcriptional repressor protein KorB DNA-binding domain
Species: Escherichia coli
Species SCOP sunid: 109712

 Set description
Number of entries: 4
SCOP Entries: d1r71a_ d1r71d_ d1r71b_ d1r71c_
Alignment File: 109712.alig
Aligned Sequences: 109712_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 109712_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 12), (113, 115)]
Uniprot Nr [(137, 149), (250, 252)]

 Invariant Regions
Region1
Alignment Nr[(13, 112)]
Uniprot Nr[(150, 249)]
Superposition109712_superp_1.pdb.gz
Rasmol Script109712_superp_1.rsm
View in Jmol