STRuster

 STRuster results: 109685

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Heat-inducible transcription repressor HrcA, N-terminal domain
Protein: Heat-inducible transcription repressor HrcA, N-terminal domain
Species: Thermotoga maritima
Species SCOP sunid: 109685

 Set description
Number of entries: 3
SCOP Entries: d1stzc1 d1stza1 d1stzb1
Alignment File: 109685.alig
Aligned Sequences: 109685_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 109685_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2)]
Uniprot Nr [(11, 13)]

 Invariant Regions
Region1
Alignment Nr[(3, 89)]
Uniprot Nr[(14, 100)]
Superposition109685_superp_1.pdb.gz
Rasmol Script109685_superp_1.rsm
View in Jmol