STRuster

 STRuster results: 109682

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: Hypothetical protein AF2008
Protein: Hypothetical protein AF2008
Species: Archaeoglobus fulgidus
Species SCOP sunid: 109682

 Set description
Number of entries: 2
SCOP Entries: d1sfxa_ d1sfxb_
Alignment File: 109682.alig
Aligned Sequences: 109682_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 109682_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (39, 41), (67, 76), (102, 110)]
Uniprot Nr [(1, 2), (38, 40), (66, 75), (101, 106)]

 Invariant Regions
Region1
Alignment Nr[(3, 38), (42, 66), (77, 101)]
Uniprot Nr[(3, 37), (41, 65), (76, 100)]
Superposition109682_superp_1.pdb.gz
Rasmol Script109682_superp_1.rsm
View in Jmol