STRuster

 STRuster results: 109658

 SCOP 1.71 classification
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: Tetracyclin repressor-like, N-terminal domain
Protein: Putative transcriptional regulator YxaF
Species: Bacillus subtilis
Species SCOP sunid: 109658

 Set description
Number of entries: 2
SCOP Entries: d1sgmb1 d1sgma1
Alignment File: 109658.alig
Aligned Sequences: 109658_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 109658_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(33, 43)]
Uniprot Nr [(38, 48)]

 Invariant Regions
Region1
Alignment Nr[(0, 32), (44, 72)]
Uniprot Nr[(5, 37), (49, 77)]
Superposition109658_superp_1.pdb.gz
Rasmol Script109658_superp_1.rsm
View in Jmol