STRuster

 STRuster results: 103489

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: V-type ATP synthase subunit C
Superfamily: V-type ATP synthase subunit C
Family: V-type ATP synthase subunit C
Protein: V-type ATP synthase subunit C
Species: Thermus thermophilus
Species SCOP sunid: 103489

 Set description
Number of entries: 4
SCOP Entries: d1r5zb_ d1r5zc_ d1v9ma_ d1r5za_
Alignment File: 103489.alig
Aligned Sequences: 103489_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 103489_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (70, 74), (102, 108), (127, 131), (241, 242), (274, 278), (308, 320)]
Uniprot Nr [(3, 7), (73, 77), (105, 111), (130, 134), (244, 245), (277, 281), (311, 323)]

 Invariant Regions
Region1
Alignment Nr[(5, 69), (75, 101), (109, 126), (132, 240), (279, 307)]
Uniprot Nr[(8, 72), (78, 104), (112, 129), (135, 243), (282, 310)]
Superposition103489_superp_1.pdb.gz
Rasmol Script103489_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(5, 69), (132, 240), (243, 273), (279, 307)]
Uniprot Nr[(8, 72), (135, 243), (246, 276), (282, 310)]
Superposition103489_superp_2.pdb.gz
Rasmol Script103489_superp_2.rsm
View in Jmol