STRuster

 STRuster results: 103429

 SCOP 1.71 classification
Class: Membrane and cell surface proteins and peptides
Fold: Single transmembrane helix
Superfamily: ISP transmembrane anchor
Family: ISP transmembrane anchor
Protein: ISP subunit from the cytochrome b6f complex, transmembrane anchor
Species: Mastigocladus laminosus
Species SCOP sunid: 103429

 Set description
Number of entries: 2
SCOP Entries: d1vf5q2 d1vf5d2
Alignment File: 103429.alig
Aligned Sequences: 103429_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 103429_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 5), (32, 33)]
Uniprot Nr [(12, 17), (44, 45)]

 Invariant Regions
Region1
Alignment Nr[(6, 31)]
Uniprot Nr[(18, 43)]
Superposition103429_superp_1.pdb.gz
Rasmol Script103429_superp_1.rsm
View in Jmol