STRuster

 STRuster results: 103227

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Family: DNA gyrase/MutL, N-terminal domain
Protein: DNA topoisomerase II
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 103227

 Set description
Number of entries: 4
SCOP Entries: d1pvga2 d1qzra2 d1pvgb2 d1qzrb2
Alignment File: 103227.alig
Aligned Sequences: 103227_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 103227_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(186, 187), (243, 244)]
Uniprot Nr [(189, 190), (244, 245)]

 Invariant Regions
Region1
Alignment Nr[(0, 185), (188, 242)]
Uniprot Nr[(7, 188), (191, 243)]
Superposition103227_superp_1.pdb.gz
Rasmol Script103227_superp_1.rsm
View in Jmol