STRuster

 STRuster results: 103122

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Origin of replication-binding domain, RBD-like
Superfamily: Origin of replication-binding domain, RBD-like
Family: Relaxase domain
Protein: F factor TraI relaxase
Species: Escherichia coli
Species SCOP sunid: 103122

 Set description
Number of entries: 3
SCOP Entries: d1p4dc_ d1p4da_ d1p4db_
Alignment File: 103122.alig
Aligned Sequences: 103122_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 103122_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 7), (266, 267), (304, 306)]
Uniprot Nr [(1, 8), (267, 268), (305, 307)]

 Invariant Regions
Region1
Alignment Nr[(8, 265), (268, 303)]
Uniprot Nr[(9, 266), (269, 304)]
Superposition103122_superp_1.pdb.gz
Rasmol Script103122_superp_1.rsm
View in Jmol