STRuster

 STRuster results: 103023

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Pseudouridine synthase
Superfamily: Pseudouridine synthase
Family: tRNA pseudouridine synthase TruD
Protein: tRNA pseudouridine synthase TruD
Species: Escherichia coli
Species SCOP sunid: 103023

 Set description
Number of entries: 5
SCOP Entries: d1szwa_ d1sb7b_ d1szwb_ d1si7a_ d1sb7a_
Alignment File: 103023.alig
Aligned Sequences: 103023_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 103023_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 0), (114, 120), (134, 138), (382, 383)]
Uniprot Nr [(1, 1), (75, 81), (95, 98), (340, 341)]

 Invariant Regions
Region1
Alignment Nr[(1, 113), (121, 133), (139, 381)]
Uniprot Nr[(1, 74), (82, 94), (99, 339)]
Superposition103023_superp_1.pdb.gz
Rasmol Script103023_superp_1.rsm
View in Jmol