STRuster

 STRuster results: 102728

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: His-Me finger endonucleases
Superfamily: His-Me finger endonucleases
Family: Endonuclease I
Protein: Periplasmic endonuclease Vvn
Species: Vibrio vulnificus
Species SCOP sunid: 102728

 Set description
Number of entries: 3
SCOP Entries: d1oupa_ d1ouoa_ d1oupb_
Alignment File: 102728.alig
Aligned Sequences: 102728_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 102728_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1)]
Uniprot Nr [(19, 20)]

 Invariant Regions
Region1
Alignment Nr[(2, 217)]
Uniprot Nr[(21, 231)]
Superposition102728_superp_1.pdb.gz
Rasmol Script102728_superp_1.rsm
View in Jmol