| STRuster results: 102695 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Periplasmic binding protein-like II |
| Superfamily: | Periplasmic binding protein-like II |
| Family: | Phosphate binding protein-like |
| Protein: | Nickel-binding periplasmic protein NikA |
| Species: | Escherichia coli |
| Species SCOP sunid: | 102695 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1uivb_ d1uiva_ d1uiua_ d1uiub_ |
| Alignment File: | 102695.alig |
| Aligned Sequences: | 102695_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 102695_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(38, 40), (52, 54), (164, 169), (216, 217), (291, 304), (344, 349), (495, 496)] |
| Uniprot Nr | [(64, 66), (78, 80), (190, 195), (242, 243), (317, 330), (370, 375), (521, 522)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 37), (41, 51), (55, 163), (170, 215)] |
| Uniprot Nr | [(26, 63), (67, 77), (81, 189), (196, 241)] |
| Superposition | 102695_superp_1.pdb.gz |
| Rasmol Script | 102695_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(41, 51), (55, 163), (170, 215), (218, 290)] |
| Uniprot Nr | [(67, 77), (81, 189), (196, 241), (244, 316)] |
| Superposition | 102695_superp_2.pdb.gz |
| Rasmol Script | 102695_superp_2.rsm |
| View in Jmol | |
| Region | 3 |
| Alignment Nr | [(41, 51), (218, 290), (305, 343), (350, 494)] |
| Uniprot Nr | [(67, 77), (244, 316), (331, 369), (376, 520)] |
| Superposition | 102695_superp_3.pdb.gz |
| Rasmol Script | 102695_superp_3.rsm |
| View in Jmol | |
