STRuster

 STRuster results: 102691

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like II
Superfamily: Periplasmic binding protein-like II
Family: Phosphate binding protein-like
Protein: Ferric-binding protein FbpA
Species: Mannheimia haemolytica
Species SCOP sunid: 102691

 Set description
Number of entries: 3
SCOP Entries: d1si0a_ d1q35a_ d1si1a_
Alignment File: 102691.alig
Aligned Sequences: 102691_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 102691_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(32, 44), (56, 68), (91, 92), (236, 237), (256, 272), (283, 284)]
Uniprot Nr [(55, 67), (79, 91), (114, 115), (259, 260), (279, 295), (306, 307)]

 Invariant Regions
Region1
Alignment Nr[(0, 31), (45, 55), (69, 90), (238, 255), (273, 282)]
Uniprot Nr[(23, 54), (68, 78), (92, 113), (261, 278), (296, 305)]
Superposition102691_superp_1.pdb.gz
Rasmol Script102691_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(93, 235), (273, 282), (285, 317)]
Uniprot Nr[(116, 258), (296, 305), (308, 340)]
Superposition102691_superp_2.pdb.gz
Rasmol Script102691_superp_2.rsm
View in Jmol