STRuster

 STRuster results: 102585

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: N6 adenine-specific DNA methylase, DAM
Protein: DNA methylase T4DAM
Species: Bacteriophage T4
Species SCOP sunid: 102585

 Set description
Number of entries: 3
SCOP Entries: d1q0ta_ d1q0sa_ d1q0tb_
Alignment File: 102585.alig
Aligned Sequences: 102585_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 102585_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(22, 25), (117, 119), (132, 134), (156, 164), (184, 186), (200, 201), (212, 223)]
Uniprot Nr [(23, 26), (118, 120), (133, 135), (157, 165), (185, 187), (201, 202), (213, 224)]

 Invariant Regions
Region1
Alignment Nr[(0, 21), (26, 116), (120, 131), (135, 155), (165, 183), (187, 199), (202, 211)]
Uniprot Nr[(1, 22), (27, 117), (121, 132), (136, 156), (166, 184), (188, 200), (203, 212)]
Superposition102585_superp_1.pdb.gz
Rasmol Script102585_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 21), (26, 116), (135, 155), (165, 183), (187, 199), (202, 211), (224, 241)]
Uniprot Nr[(1, 22), (27, 117), (136, 156), (166, 184), (188, 200), (203, 212), (225, 242)]
Superposition102585_superp_2.pdb.gz
Rasmol Script102585_superp_2.rsm
View in Jmol