| STRuster results: 102109 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | TIM beta/alpha-barrel |
| Superfamily: | Homocysteine S-methyltransferase |
| Family: | Homocysteine S-methyltransferase |
| Protein: | Cobalamin-dependent methionine synthase MetH, N-terminal domain |
| Species: | Thermotoga maritima |
| Species SCOP sunid: | 102109 |
| Set description |
| Number of entries: | 12 |
| SCOP Entries: | d1q7za2 d1q8aa2 d1q7ma2 d1q8jb2 d1q7mb2 d1q7qa2 d1q7zb2 d1q7qb2 d1q8ja2 d1q85b2 d1q85a2 d1q8ab2 |
| Alignment File: | 102109.alig |
| Aligned Sequences: | 102109_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 102109_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(23, 30), (240, 250)] |
| Uniprot Nr | [(23, 29), (236, 246)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 22), (31, 239), (251, 304)] |
| Uniprot Nr | [(1, 22), (30, 235), (247, 300)] |
| Superposition | 102109_superp_1.pdb.gz |
| Rasmol Script | 102109_superp_1.rsm |
| View in Jmol | |
