STRuster

 STRuster results: 102035

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: Triosephosphate isomerase (TIM)
Family: Triosephosphate isomerase (TIM)
Protein: Triosephosphate isomerase
Species: Rabbit (Oryctolagus cuniculus)
Species SCOP sunid: 102035

 Set description
Number of entries: 10
SCOP Entries: d1r2ra_ d1r2sb_ d1r2rd_ d1r2sd_ d1r2tb_ d1r2rb_ d1r2ta_ d1r2sa_ d1r2sc_ d1r2rc_
Alignment File: 102035.alig
Aligned Sequences: 102035_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 102035_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(166, 173), (245, 246)]
Uniprot Nr [(168, 175), (247, 248)]

 Invariant Regions
Region1
Alignment Nr[(0, 165), (174, 244)]
Uniprot Nr[(2, 167), (176, 246)]
Superposition102035_superp_1.pdb.gz
Rasmol Script102035_superp_1.rsm
View in Jmol